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Trans-ABySS 1.3.2 (build 20120516)
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by
Ka Ming Nip
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last modified
May 16, 2012 10:22 AM
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Trans-ABySS 1.3.2
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Trans-ABySS 1.5.4
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by
Ka Ming Nip
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published
May 09, 2016
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last modified
May 09, 2016 03:08 PM
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filed under:
rnaseq,
assembly,
transcriptome
Removed transabyss-analyze and its associated modules.
We recommend using PAVFinder for structural variant detection.
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Trans-ABySS 1.4.4
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by
Ka Ming Nip
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last modified
Oct 11, 2012 05:02 PM
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Trans-ABySS 1.4.4
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transabyss-1.5.4.zip
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by
Ka Ming Nip
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last modified
Jun 16, 2016 09:39 AM
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Trans-ABySS 1.5.4
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Trans-ABySS 1.5.5
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by
Ka Ming Nip
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published
Aug 02, 2016
Set default shortest contig length to 100 bp. Skip blat alignments during assembly.
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transabyss-1.5.5.zip
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by
Ka Ming Nip
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last modified
Aug 02, 2016 11:13 AM
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Trans-ABySS 1.5.5
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User Manual
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by
Ka Ming Nip
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last modified
Nov 28, 2011 04:04 PM
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ABySS-Explorer 1.3.0
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Java Web Start link
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by
Ka Ming Nip
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last modified
Nov 28, 2011 04:05 PM
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ABySS-Explorer 1.3.0
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test assembly (E.coli, ABySS 1.3.1, k32)
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by
Ka Ming Nip
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last modified
Nov 28, 2011 04:56 PM
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ABySS-Explorer 1.3.0
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Trans-ABySS 1.5.1
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by
Ka Ming Nip
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published
Jul 22, 2014
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filed under:
rnaseq,
assembly,
transcriptome
Support strand-specific RNAseq data.
Major improvement in assembly quality; both rare and common transcripts can be assembled well with "small" k-mer sizes (ie. 25~32).
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