Canada's Michael Smith Genome Sciences Centre

Releases: by Shaun Jackman — last modified Aug 19, 2014 10:55 AM
Existing and upcoming releases for ABySS.
Located in Platforms / … / GSC Software Centre / ABySS
Debian package (amd64): by Shaun Jackman — last modified Jun 04, 2012 11:12 AM
Located in Platforms / … / Releases / ABySS 1.3.4
Source: by Shaun Jackman — last modified May 30, 2012 03:21 PM
Located in Platforms / … / Releases / ABySS 1.3.4
ABySS 1.3.4: by Shaun Jackman — published May 30, 2012 — last modified May 30, 2012 04:07 PM
This release eliminates two sources of misassemblies, one in the path extension logic of SimpleGraph. Two, the default value of m, which is the minimum overlap required between two contigs to merge them, is increased from 30 to 50. This release also fixes various portability issues. A new script, abyss-fatoagp, is included to create an AGP file for GenBank submission.
Located in Platforms / … / ABySS / Releases
Debian package (amd64): by Shaun Jackman — last modified Mar 13, 2012 06:02 PM
Located in Platforms / … / Releases / ABySS 1.3.3
Mac OS X package (Intel Core i3 or better): by Shaun Jackman — last modified Mar 13, 2012 03:19 PM
Located in Platforms / … / Releases / ABySS 1.3.3
ABySS 1.3.3: by Shaun Jackman — published Mar 13, 2012 — last modified May 30, 2012 04:07 PM
Specify the minimum alignment length when aligning the reads to the contigs with the parameter l. Improve the scaffolding algorithm that identifies repeats. Improve the documentation.
Located in Platforms / … / ABySS / Releases
Source: by Shaun Jackman — last modified Mar 13, 2012 03:02 PM
Located in Platforms / … / Releases / ABySS 1.3.3
Mac OS X package (Intel Core 2): by Shaun Jackman — last modified Feb 14, 2012 01:01 PM
Located in Platforms / … / Releases / ABySS 1.3.2
Mac OS X package (Intel Core i3 or better): by Shaun Jackman — last modified Feb 14, 2012 12:35 PM
Located in Platforms / … / Releases / ABySS 1.3.2

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