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Bioinformatic Services

The GSC provides numerous innovative bioinformatic services.

Our bioinformatic services include data deposition, database construction, laboratory information management and a host of applications and analyses, including customized projects. Some of our pipelines are listed below. Additional services are available upon request. For questions about services and collaborative opportunities, please contact us: .

Somatic analysis
  • single sample
  • paired tumour / normal
  • multiple timepoint
  • targeted analysis of specific variants
Cancer immunogenetics
  • HLA typing
  • neoantigen prediction
  • tumour cell type abundance
  • clonotype analysis of T and B cell receptor repertoire
Epigenetic analysis
  • ChIP peak calling
  • methylation analysis
Structural variant analysis
  • copy number changes
  • alignment based SV calling
  • assembly based SV calling
  • consensus SV calling
Expression analysis
  • RNA gene and exon level quantification
  • RNA transcript isoform level quantification
  • miRNA expression quantification
  • miRNA novel gene prediction
Germline analysis
  • single sample
  • trio analysis
  • pedigree calling
Genome assembly
  • non-reference organism
  • human genome assembly analysis

Learn more about our sequencing services, here.

Looking for assistance? Let us know how we can help.

For additional information or to arrange for a cost quotation, please contact us:

Statement of Work Project Management Team
Genome Sciences Centre, BC Cancer
Suite 100, 570 West 7th Ave
Vancouver, BC, V5Z 4S6
Phone: (604) 707-5800

Page last modified Mar 19, 2019