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Profiling the T-cell Receptor Beta-chain Repertoire by Massively Parallel Sequencing

In this paper we tested a method for sequence-based immunoprofiling, using short reads provided by the Illumina platform and the issake sequence assembly program. The results of this study provide new insight into T-cell receptor recombination and expand the number of publicly available T-cell receptor sequences by an order of magnitude

 

1,*J Douglas Freeman, 1,*René L Warren, 2John R Webb, 2Brad H Nelson and 1Robert A Holt Genome Res. 2009 Jul 13. [Epub ahead of print] PMID: 19541912

 

 

1BC Cancer Agency, Michael Smith Genome Sciences Centre, 675 West 10th Avenue, Vancouver, BC V5Z 1L3 Canada  

2BC Cancer Agency, Deeley Research Centre, 2410 Lee Ave, Victoria, BC V8R 6V5 Canada

Page last modified Sep 14, 2009