by
Lucas Swanson
—
published
Oct 23, 2012
—
last modified
Dec 05, 2012 10:15 AM
A pipeline for detecting and characterizing chimeric transcripts from long RNA sequences, such as those generated by de novo transcriptome assembly. It identifies sequences with a variety of anomalous alignment topologies, predicts partial tandem duplications (PTDs), internal tandem duplications (ITDS), and fusions from these sequences, and measures the coverage of the inferred chimeric transcripts relative to corresponding wild-type transcripts.
Located in
Platforms
/
Bioinformatics
/
GSC Software Centre
