Barnacle 1.0.4 (Feb 24, 2016)
Bugfixes and stability improvements.
For additional information about this project, please visit the overview page .
Available downloads
Release Notes
| State | Final release |
|---|---|
| License | BCCA (academic use) |
| Release Manager | Lucas Swanson |
This update fixes several bugs encountered while parsing SAM files as well as when annotating predictions with genes. It also adds a rudimentary output parser for generating targeted reports and a 'robust' mode to allow Barnacle to skip problematic contigs and keep running on the rest of the input data.
Change log
Major changes since version 1.0.3
- fix several bugs in the parser for SAM-formatted contig-to-genome alignment files
- fix a bug in the code for annotating predictions with gene names
- fix a bug in the read-to-contig support calculator for when no read support is found for any events
- add rudimentary output parser for creating targeted ITD reports
- add 'robust' mode to allow Barnacle to skip problematic contigs and keep running on the rest of the input data
