ABySS 1.1.1 (Jan 19, 2010)

ABySS

Pop complex bubbles either completely or not at all. Choose better (typically lower) default values for the parameters e and c.

For additional information about this project, please visit the overview page .

Available downloads

Source

For all platforms (256 kB)

Release Notes

State Final release
License AFL

2010-01-19 Shaun Jackman <sjackman@bcgsc.ca>

* Release version 1.1.1.

ABYSS:
* Pop complex bubbles either completely or not at all. Bubble
popping now completes in a single round.
* Choose better (typically lower) default values for the
parameters -e,--erode and -c,--coverage. The default threshold is
the square root of the median k-mer coverage.