ABySS 2.1.2 (Oct 24, 2018)

ABySS

This release improves scaffold N50 on human by ~10%, due to implementation of a new `--median` option for `DistanceEst` (thanks to @lcoombe!). This release also adds a new `--max-cost` option for `konnector` and `abyss-sealer` that curbs indeterminately long running times, particularly at low k values.

For additional information about this project, please visit the overview page .

Available downloads

source code

For all platforms (1.2 MB)

Release Notes

State Final release
License GPLv3

abyss-pe:
* Use the new `DistanceEst --median` option as the
default for the scaffolding stage

Dockerfile:
* Fix OpenMPI setup

DistanceEst:
* Added `--median` option

konnector:
* Added `--max-cost` option to bound running time

sealer:
* Added `--max-cost` option to bound running time