Existing and upcoming releases for this project.

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Experimental Releases

Stable Releases

LINKS 1.8.6 (Mar 13, 2018)
Use v1.8.5 if running LINKS to scaffold with long reads*. When pipelined with ARCS, LINKS v1.8.6 prioritizes paths with shorter gaps only when there are no ambiguous gap distance estimates with neighboring sequences.
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LINKS 1.8.5 (Feb 01, 2017)
Enhanced graph output when pipelined with ARCS
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LINKS 1.8.4 (Sep 14, 2016)
license changed to GPLv3
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LINKS 1.8.3 (Aug 08, 2016)
v1.8.3 fixes a bug introduced in v1.8.1 that caused sequence overuse
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LINKS 1.8 (Apr 18, 2016)
Native support for iterative k-mer pair extraction at distinct length intervals
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LINKS 1.7 (Mar 18, 2016)
Support for scaffolding with MPET (jumping library) reads
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LINKS 1.6.1 (Feb 24, 2016)
Incorporation of the BC Genome Sciences Centre custom Bloom filter with the recursive nucleotide hash function (ntHash).
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LINKS 1.5.2 (Sep 18, 2015)
LINKS outputs a scaffold graph in gv format, with highlighted linkages and edge attributes
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LINKS 1.5.1 (Jul 12, 2015)
bug fix.
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LINKS 1.5 (Apr 24, 2015)
Bloom filter implementation for reduced memory usage and faster execution.
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LINKS 1.3 (Apr 22, 2015)
Added support for multiple input files and FASTQ files
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LINKS 1.2 (Apr 12, 2015)
bug fix
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LINKS 1.1 (Jan 01, 2015)
Included offset option (-o option), which enable LINKS to explore a wider k-mer space range when running iteratively Minor fixes: IUPAC codes are now preserved
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